Publications

Nunes I., Jacquiod S., Brejnrod A., Holm P.E, Johansen A., Brandt K.K, Prieme A., Sorensen S.J.  2016.  Coping with copper: legacy effect of copper on potential activity of soil bacteria following a century of exposure. FEMS Microbiology Ecology. 92:12.

Oren A., Steinberger Y..  2008.  Coping with artifacts induced by CaCO3–CO2–H2O equilibria in substrate utilization profiling of calcareous soils. Soil Biology and Biochemistry. 40:2569-2577.

Dacal M, García-Palacios P, Asensio S, Cano-Díaz C, Gozalo B, Ochoa V, Maestre FT.  2020.  Contrasting mechanisms underlie short- and longer-term soil respiration responses to experimental warming in a dryland ecosystem. Global Change Biology. 26:5254-5266.

Garcia-Palacios P., Shaw E.A, Wall D.H, Hattenschwiler S..  2017.  Contrasting mass-ratio vs. niche complementarity effects on litter C and N loss during decomposition along a regional climatic gradient. Journal of Ecology. 105:968-978.

Bittleston L.S, Gralka M., Leventhal G.E, Mizrahi I., Cordero O.X.  2020.  Context-dependent dynamics lead to the assembly of functionally distinct microbial communities. Nature Communications. 11:10.

Wacker T.S, Jensen L.S, Thorup-Kristensen K..  2022.  Conservation agriculture affects soil organic matter distribution, microbial metabolic capacity and nitrogen turnover under Danish field conditions. Soil & Tillage ResearchSoil & Tillage Research. 224:13.

Chodak M., Klimek B., Niklinska M..  2016.  Composition and activity of soil microbial communities in different types of temperate forests. Biology and Fertility of Soils. 52:1093-1104.

Foster KR, Bell T.  2012.  Competition, Not Cooperation, Dominates Interactions among Culturable Microbial Species. Current Biology. 22:1845-1850.

Lalor B.M, Cookson W.R, Murphy D.V.  2007.  Comparison of two methods that assess soil community level physiological profiles in a forest ecosystem. Soil Biology and Biochemistry. 39:454-462.

Mustafa A., Holatko J., Hammerschmiedt T., Kucerik J., Skarpa P., Kintl A., Racek J., Baltazar T., Malicek O., Brtnicky M..  2022.  Comparison of the Responses of Soil Enzymes, Microbial Respiration and Plant Growth Characteristics under the Application of Agricultural and Food Waste-Derived Biochars. Agronomy-Basel. 12:14.

Ujvari G., Borsodi A.K, Megyes M., Mucsi M., Szili-Kovacs T., Szabo A., Szalai Z., Jakab G., Marialigeti K..  2020.  Comparison of Soil Bacterial Communities from Juvenile Maize Plants of a Long-Term Monoculture and a Natural Grassland. Agronomy-Basel. 10:15.

Vinten A.JA, Artz R.RE, Thomas N., Potts J.M, Avery L., Langan S.J, Watson H., Cook Y., Taylor C., Abel C. et al..  2011.  Comparison of microbial community assays for the assessment of stream biofilm ecology. Journal of Microbiological Methods. 85:190-198.

Adapa L.M, Azimi Y., Singh S., Porcelli D., Thompson I.P.  2016.  Comparative study of chemical and physical methods for distinguishing between passive and metabolically active mechanisms of water contaminant removal by biofilms. Water Research. 101:574-581.

Drage S., Engelmeier D., Bachmann G., Sessitsch A., Mitter B., Hadacek F..  2012.  Combining microdilution with MicroResp (TM): Microbial substrate utilization, antimicrobial susceptibility and respiration. Journal of Microbiological Methods. 88:399-412.

Drut B., Fustec J., Oddos L., Cannavacciuolo M., Brauman A., Cassagne N..  2023.  The combined effects of faba bean and endogeic earthworms on soil microbial activity in intercrops. European Journal of Soil Biology. 117:11.

Xu Y.G, Yu W.T, Ma Q., Wang J., Zhou H., Jiang C.M.  2016.  The combined effect of sulfadiazine and copper on soil microbial activity and community structure. Ecotoxicology and Environmental Safety. 134:43-52.

Hammerschmiedt T., Holatko J., Zelinka R., Kintl A., Skarpa P., Bytesnikova Z., Richtera L., Mustafa A., Malicek O., Brtnicky M..  2023.  The combined effect of graphene oxide and elemental nano-sulfur on soil biological properties and lettuce plant biomass. Frontiers in Plant Science. 14:10.

Fritz A.L, Jannoura R., Beuschel R., Steiner C., Buerkert A., Joergensen R.G.  2022.  The combined application of nitrogen and biochar reduced microbial carbon limitation in irrigated soils of West African urban horticulture. Chemical and Biological Technologies in Agriculture. 9:12.

Holatko J., Hammerschmiedt T., Kintl A., Mustafa A., Naveed M., Baltazar T., Latal O., Skarpa P., Ryant P., Brtnicky M..  2022.  Co-composting of cattle manure with biochar and elemental sulphur and its effects on manure quality, plant biomass and microbiological characteristics of post-harvest soil. Frontiers in Plant Science. 13:14.

Juárez MFernández, Prähauser B, Walter A, Insam H, Franke-Whittle IH.  2015.  Co-composting of biowaste and wood ash, influence on a microbially driven-process. Waste Management. 46:155-164.

Astacio L.MD, Prabhakara K.H, Li Z.Q, Mickalide H., Kuehn S..  2021.  Closed microbial communities self-organize to carbon. Proceedings of the National Academy of Sciences of the United States of America. 118:9.

Dacal M., Garcia-Palacios P., Asensio S., Wang J.T, Singh B.K, Maestre F.T.  2022.  Climate change legacies contrastingly affect the resistance and resilience of soil microbial communities and multifunctionality to extreme drought. Functional Ecology. 36:908-920.

McDaniel M.D, Kaye J.P, Kaye M.W, Bruns M.A.  2014.  Climate change interactions affect soil carbon dioxide efflux and microbial functioning in a post-harvest forest. Oecologia. 174:1437-1448.

Squartini A, Fusaro S, Concheri G.  2018.  Cheap and portable lab-free respiration assay. Applied Soil Ecology. 123:797-801.

Zhang K., Wang S., Guo P.H, Guo S.H.  2021.  Characteristics of organic carbon metabolism and bioremediation of petroleum-contaminated soil by a mesophilic aerobic biopile system. Chemosphere. 264:11.