Impacts of plant domestication on soil microbial and nematode communities during litter decomposition

TitleImpacts of plant domestication on soil microbial and nematode communities during litter decomposition
Publication TypeJournal Article
Year of Publication2023
AuthorsPalomino J., Garcia-Palacios P., De Deyn G.B, Martinez-Garcia L.B, Sanchez-Moreno S., Milla R.
JournalPlant and Soil
Volume487
Pagination419-436
Date PublishedJun
Type of ArticleArticle
ISBN Number0032-079X
Accession NumberWOS:000937961900002
KeywordsAgriculture, amendments, Bacteria, bacterial, diversity, dynamics, ecology, Fungi, indicators, leaf-litter, litter decomposition, Litter quality, nematodes, patterns, plant domestication, Plant Sciences, quality, rates
Abstract

PurposePlant domestication altered leaf litter quality. Since litter traits relate to soil functions and organisms (i.e., litter decomposition and soil decomposer communities), in this study we explore if domestication-induced changes in litter quality have affected their decomposability, and bacterial, fungal, and nematode communities in the soil.MethodsWe collected leaf litter from herbaceous crops and their wild progenitors, and measured litter chemical and physical traits. Then, we performed a litter decomposition assay on a common soil. After three months of litter incubation, we measured mass loss, nematode richness and community composition in ten crops. We also measured soil bacterial and fungal richness and community composition in six crops.ResultsDomesticated litters had less carbon (C) and leaf dry matter content (LDMC), which accelerated decomposition in comparison to wild litters. Fungal richness was higher in microcosms incubated with domesticated litters, while the effects of domestication on bacterial richness differed among crops. Domestication did not affect nematode richness. The effects of domestication on bacterial and fungal community compositions differed among crops. Soils with domesticated litters tended to have nematode communities with a higher abundance of bacterial feeding nematodes, in comparison to soils fed with wild litters.ConclusionDomestication altered decomposition at different levels. Leaf litter decomposability increased with domestication, which might alter resource inputs into the soil. Feeding soils with domesticated litters had idiosyncratic effects on soil microbes, but consistent effects on soil nematodes. Overall, domestication altered the linkages between crop residues and soil communities differently for bacteria, fungi, and nematodes.

Short TitlePlant SoilPlant Soil
Alternate JournalPlant Soil
stdClass Object
(
    [vid] => 830
    [uid] => 11
    [title] => Impacts of plant domestication on soil microbial and nematode communities during litter decomposition
    [log] => 
    [status] => 1
    [comment] => 0
    [promote] => 1
    [sticky] => 0
    [nid] => 660
    [type] => biblio
    [language] => und
    [created] => 1691491380
    [changed] => 1691491380
    [tnid] => 0
    [translate] => 0
    [revision_timestamp] => 1691491380
    [revision_uid] => 11
    [biblio_type] => 102
    [biblio_number] => 1-2
    [biblio_other_number] => 
    [biblio_sort_title] => Impacts of plant domestication on soil microbial and nematode co
    [biblio_secondary_title] => Plant and Soil
    [biblio_tertiary_title] => 
    [biblio_edition] => 
    [biblio_publisher] => 
    [biblio_place_published] => 
    [biblio_year] => 2023
    [biblio_volume] => 487
    [biblio_pages] => 419-436
    [biblio_date] => Jun
    [biblio_isbn] => 0032-079X
    [biblio_lang] => English
    [biblio_abst_e] => PurposePlant domestication altered leaf litter quality. Since litter traits relate to soil functions and organisms (i.e., litter decomposition and soil decomposer communities), in this study we explore if domestication-induced changes in litter quality have affected their decomposability, and bacterial, fungal, and nematode communities in the soil.MethodsWe collected leaf litter from herbaceous crops and their wild progenitors, and measured litter chemical and physical traits. Then, we performed a litter decomposition assay on a common soil. After three months of litter incubation, we measured mass loss, nematode richness and community composition in ten crops. We also measured soil bacterial and fungal richness and community composition in six crops.ResultsDomesticated litters had less carbon (C) and leaf dry matter content (LDMC), which accelerated decomposition in comparison to wild litters. Fungal richness was higher in microcosms incubated with domesticated litters, while the effects of domestication on bacterial richness differed among crops. Domestication did not affect nematode richness. The effects of domestication on bacterial and fungal community compositions differed among crops. Soils with domesticated litters tended to have nematode communities with a higher abundance of bacterial feeding nematodes, in comparison to soils fed with wild litters.ConclusionDomestication altered decomposition at different levels. Leaf litter decomposability increased with domestication, which might alter resource inputs into the soil. Feeding soils with domesticated litters had idiosyncratic effects on soil microbes, but consistent effects on soil nematodes. Overall, domestication altered the linkages between crop residues and soil communities differently for bacteria, fungi, and nematodes.
    [biblio_abst_f] => 
    [biblio_full_text] => 0
    [biblio_url] => 
    [biblio_issue] => 
    [biblio_type_of_work] => Article
    [biblio_accession_number] => WOS:000937961900002
    [biblio_call_number] => 
    [biblio_notes] => ISI Document Delivery No.: I8SX0
Times Cited: 0
Cited Reference Count: 79
Palomino, Javier Garcia-Palacios, Pablo De Deyn, Gerlinde B. B. Martinez-Garcia, Laura Beatriz Sanchez-Moreno, Sara Milla, Ruben
Martinez-Garcia, Laura Beatriz/AAA-4171-2020; Milla, Ruben/A-3739-2009; De Deyn, Gerlinde/C-1593-2009; Garcia-Palacios, Pablo/K-7567-2014
Martinez-Garcia, Laura Beatriz/0000-0002-0648-1955; Sanchez Moreno, Sara/0000-0003-4558-0304; Milla, Ruben/0000-0001-8912-4373; De Deyn, Gerlinde/0000-0003-4823-6912; Garcia-Palacios, Pablo/0000-0002-6367-4761; Palomino de la Rosa, Javier/0000-0002-4263-5034
CRUE-CSIC; Springer Nature
Open Access funding provided thanks to the CRUE-CSIC agreement with Springer Nature.

26
Springer
Dordrecht
1573-5036 [biblio_custom1] => [biblio_custom2] => [biblio_custom3] => [biblio_custom4] => [biblio_custom5] => [biblio_custom6] => [biblio_custom7] => [biblio_research_notes] => [biblio_number_of_volumes] => [biblio_short_title] => Plant SoilPlant Soil [biblio_alternate_title] => Plant Soil [biblio_original_publication] => [biblio_reprint_edition] => [biblio_translated_title] => [biblio_section] => [biblio_citekey] => 660 [biblio_coins] => [biblio_doi] => [biblio_issn] => [biblio_auth_address] => [Palomino, Javier; Milla, Ruben] Univ Rey Juan Carlos, Escuela Super Ciencias Expt & Tecnol, Dept Biol & Geol, Area Biodivers & Conservac, Tulipan S-N, Mostoles 28933, Spain. [Garcia-Palacios, Pablo] CSIC, Inst Ciencias Agr, Serrano 115 Bis, Madrid 28006, Spain. [De Deyn, Gerlinde B. B.; Martinez-Garcia, Laura Beatriz] Wageningen Univ, Soil Biol Grp, NL-6700 AA Wageningen, Netherlands. [Sanchez-Moreno, Sara] CSIC, Inst Nacl Invest & Tecnol Agr & Alimentaria, Ctra Coruna Km 7-5, Madrid 28040, Spain. Cientificas (CSIC); CSIC - Instituto de Ciencias Agrarias (ICA); Wageningen University & Research; Consejo Superior de Investigaciones Cientificas (CSIC); Instituto Nacional Investigacion Tecnologia Agraria Alimentaria (INIA)
Palomino, J (corresponding author), Univ Rey Juan Carlos, Escuela Super Ciencias Expt & Tecnol, Dept Biol & Geol, Area Biodivers & Conservac, Tulipan S-N, Mostoles 28933, Spain.; Garcia-Palacios, P (corresponding author), CSIC, Inst Ciencias Agr, Serrano 115 Bis, Madrid 28006, Spain.
javier.palomino@urjc.es; pablo.garcia@ica.csic.es [biblio_remote_db_name] => [biblio_remote_db_provider] => [biblio_label] => [biblio_access_date] => [biblio_refereed] => [biblio_md5] => 81c633d35d8ab454868b15111e7ad393 [biblio_formats] => Array ( [biblio_abst_e] => full_html [biblio_abst_f] => full_html [biblio_notes] => full_html [biblio_research_notes] => full_html [biblio_custom1] => full_html [biblio_custom2] => full_html [biblio_custom3] => full_html [biblio_custom4] => full_html [biblio_custom5] => full_html [biblio_custom6] => full_html [biblio_custom7] => full_html [biblio_coins] => full_html [biblio_auth_address] => full_html ) [biblio_type_name] => Journal Article [biblio_contributors] => Array ( [0] => Array ( [nid] => 660 [vid] => 830 [cid] => 1908 [auth_type] => 1 [auth_category] => 1 [rank] => 0 [merge_cid] => 0 [aka] => 0 [alt_form] => 0 [drupal_uid] => [name] => Palomino, J. [lastname] => Palomino [firstname] => J. [prefix] => [suffix] => [initials] => [affiliation] => [literal] => 0 [md5] => 7bc12516d74cd7d75caaa4ecb5aa515b ) [1] => Array ( [nid] => 660 [vid] => 830 [cid] => 408 [auth_type] => 1 [auth_category] => 1 [rank] => 1 [merge_cid] => 0 [aka] => 0 [alt_form] => 0 [drupal_uid] => [name] => Garcia-Palacios, P. [lastname] => Garcia-Palacios [firstname] => P. [prefix] => [suffix] => [initials] => [affiliation] => [literal] => 0 [md5] => 0d4fdbd997de5c3f3f768efd94017afe ) [2] => Array ( [nid] => 660 [vid] => 830 [cid] => 1909 [auth_type] => 1 [auth_category] => 1 [rank] => 2 [merge_cid] => 0 [aka] => 0 [alt_form] => 0 [drupal_uid] => [name] => De Deyn, G. B. [lastname] => De Deyn [firstname] => G. [prefix] => [suffix] => [initials] => B. [affiliation] => [literal] => 0 [md5] => a36d63782780cd347cc3a021cb4a3191 ) [3] => Array ( [nid] => 660 [vid] => 830 [cid] => 1910 [auth_type] => 1 [auth_category] => 1 [rank] => 3 [merge_cid] => 0 [aka] => 0 [alt_form] => 0 [drupal_uid] => [name] => Martinez-Garcia, L. B. [lastname] => Martinez-Garcia [firstname] => L. [prefix] => [suffix] => [initials] => B. [affiliation] => [literal] => 0 [md5] => 93a5054be47011d43a3c0f32b04ee691 ) [4] => Array ( [nid] => 660 [vid] => 830 [cid] => 1911 [auth_type] => 1 [auth_category] => 1 [rank] => 4 [merge_cid] => 0 [aka] => 0 [alt_form] => 0 [drupal_uid] => [name] => Sanchez-Moreno, S. [lastname] => Sanchez-Moreno [firstname] => S. [prefix] => [suffix] => [initials] => [affiliation] => [literal] => 0 [md5] => e9c787f0b94be4ab94724cd3222c4b7c ) [5] => Array ( [nid] => 660 [vid] => 830 [cid] => 413 [auth_type] => 1 [auth_category] => 1 [rank] => 5 [merge_cid] => 0 [aka] => 0 [alt_form] => 0 [drupal_uid] => [name] => Milla, R. [lastname] => Milla [firstname] => R. [prefix] => [suffix] => [initials] => [affiliation] => [literal] => 0 [md5] => 1c5abbe22be18bcb53a41d2d5e3caba7 ) ) [biblio_keywords] => Array ( [421] => Agriculture [81] => amendments [117] => Bacteria [561] => bacterial [132] => diversity [376] => dynamics [318] => ecology [120] => Fungi [1192] => indicators [1096] => leaf-litter [164] => litter decomposition [405] => Litter quality [975] => nematodes [38] => patterns [1268] => plant domestication [954] => Plant Sciences [196] => quality [20] => rates ) [body] => Array ( ) [rdf_mapping] => Array ( [rdftype] => Array ( [0] => sioc:Item [1] => foaf:Document ) [title] => Array ( [predicates] => Array ( [0] => dc:title ) ) [created] => Array ( [predicates] => Array ( [0] => dc:date [1] => dc:created ) [datatype] => xsd:dateTime [callback] => date_iso8601 ) [changed] => Array ( [predicates] => Array ( [0] => dc:modified ) [datatype] => xsd:dateTime [callback] => date_iso8601 ) [body] => Array ( [predicates] => Array ( [0] => content:encoded ) ) [uid] => Array ( [predicates] => Array ( [0] => sioc:has_creator ) [type] => rel ) [name] => Array ( [predicates] => Array ( [0] => foaf:name ) ) [comment_count] => Array ( [predicates] => Array ( [0] => sioc:num_replies ) [datatype] => xsd:integer ) [last_activity] => Array ( [predicates] => Array ( [0] => sioc:last_activity_date ) [datatype] => xsd:dateTime [callback] => date_iso8601 ) ) [name] => clare.cameron [picture] => 0 [data] => a:13:{s:16:"ckeditor_default";s:1:"t";s:20:"ckeditor_show_toggle";s:1:"t";s:14:"ckeditor_width";s:4:"100%";s:13:"ckeditor_lang";s:2:"en";s:18:"ckeditor_auto_lang";s:1:"t";s:19:"biblio_show_profile";i:0;s:19:"biblio_my_pubs_menu";i:0;s:21:"biblio_contributor_id";s:1:"0";s:22:"biblio_id_change_count";s:1:"0";s:17:"biblio_user_style";s:6:"system";s:18:"biblio_baseopenurl";s:0:"";s:18:"biblio_openurl_sid";s:0:"";s:19:"biblio_crossref_pid";s:0:"";} [entity_view_prepared] => 1 )