| Title | METABOLIC ACTIVITY AND GENETIC DIVERSITY OF MICROBIAL COMMUNITIES INHABITING THE RHIZOSPHERE OF HALOPHYTON PLANTS |
| Publication Type | Journal Article |
| Year of Publication | 2014 |
| Authors | Barany A., Szili-Kovacs T., Krett G., Fuzy A., Marialigeti K., Borsodi A.K |
| Journal | Acta Microbiologica Et Immunologica Hungarica |
| Volume | 61 |
| Pagination | 347-361 |
| Date Published | Sep |
| Type of Article | Article |
| ISBN Number | 1217-8950 |
| Accession Number | WOS:000343136500008 |
| Keywords | bacterial communities, biomass, carbon, DGGE, Immunology, Microbiology, MicroResp, rhizosphere bacterial communities, sir, soda soil, soil |
| Abstract | A preliminary study was conducted to compare the community level physiological profile (CLPP) and genetic diversity of rhizosphere microbial communities of four plant species growing nearby Kiskunsag soda ponds, namely Boddi-szek, Kelemen-szek and Zab-szek. CLPP was assessed by MicroResp method using 15 different substrates while Denaturing Gradient Gel Electrophoresis (DGGE) was used to analyse genetic diversity of bacterial communities. The soil physical and chemical properties were quite different at the three sampling sites. Multivariate statistics (PCA and UPGMA) revealed that Zab-szek samples could be separated according to their genetic profile from the two others which might be attributed to the geographical location and perhaps the differences in soil physical properties. Boddi-szek samples could be separated from the two others considering the metabolic activity which could be explained by their high salt and low humus contents. The number of bands in DGGE gels was related to the metabolic activity, and positively correlated with soil humus content, but negatively with soil salt content. The main finding was that geographical location, soil physical and chemical properties and the type of vegetation were all important factors influencing the metabolic activity and genetic diversity of rhizosphere microbial communities.
|
| Short Title | Acta Microbiol. Immunol. Hung.Acta Microbiol. Immunol. Hung. |
| Alternate Journal | Acta Microbiol. Immunol. Hung. |
stdClass Object
(
[vid] => 725
[uid] => 11
[title] => METABOLIC ACTIVITY AND GENETIC DIVERSITY OF MICROBIAL COMMUNITIES INHABITING THE RHIZOSPHERE OF HALOPHYTON PLANTS
[log] =>
[status] => 1
[comment] => 0
[promote] => 1
[sticky] => 0
[nid] => 597
[type] => biblio
[language] => und
[created] => 1656000330
[changed] => 1656000330
[tnid] => 0
[translate] => 0
[revision_timestamp] => 1656000330
[revision_uid] => 11
[biblio_type] => 102
[biblio_number] => 3
[biblio_other_number] =>
[biblio_sort_title] => METABOLIC ACTIVITY AND GENETIC DIVERSITY OF MICROBIAL COMMUNITIE
[biblio_secondary_title] => Acta Microbiologica Et Immunologica Hungarica
[biblio_tertiary_title] =>
[biblio_edition] =>
[biblio_publisher] =>
[biblio_place_published] =>
[biblio_year] => 2014
[biblio_volume] => 61
[biblio_pages] => 347-361
[biblio_date] => Sep
[biblio_isbn] => 1217-8950
[biblio_lang] => English
[biblio_abst_e] => A preliminary study was conducted to compare the community level physiological profile (CLPP) and genetic diversity of rhizosphere microbial communities of four plant species growing nearby Kiskunsag soda ponds, namely Boddi-szek, Kelemen-szek and Zab-szek. CLPP was assessed by MicroResp method using 15 different substrates while Denaturing Gradient Gel Electrophoresis (DGGE) was used to analyse genetic diversity of bacterial communities. The soil physical and chemical properties were quite different at the three sampling sites. Multivariate statistics (PCA and UPGMA) revealed that Zab-szek samples could be separated according to their genetic profile from the two others which might be attributed to the geographical location and perhaps the differences in soil physical properties. Boddi-szek samples could be separated from the two others considering the metabolic activity which could be explained by their high salt and low humus contents. The number of bands in DGGE gels was related to the metabolic activity, and positively correlated with soil humus content, but negatively with soil salt content. The main finding was that geographical location, soil physical and chemical properties and the type of vegetation were all important factors influencing the metabolic activity and genetic diversity of rhizosphere microbial communities.
[biblio_abst_f] =>
[biblio_full_text] => 0
[biblio_url] =>
[biblio_issue] =>
[biblio_type_of_work] => Article
[biblio_accession_number] => WOS:000343136500008
[biblio_call_number] =>
[biblio_notes] => ISI Document Delivery No.: AQ9BQ
Times Cited: 6
Cited Reference Count: 30
Barany, Agnes Szili-Kovacs, Tibor Krett, Gergely Fuezy, Anna Marialigeti, Karoly Borsodi, Andrea K.
Borsodi, Andrea K./H-1148-2017; Szili-Kovács, Tibor/AAJ-9680-2020
Borsodi, Andrea K./0000-0002-3738-7937; Szili-Kovács, Tibor/0000-0002-8354-0656
Hungarian Scientific Research Fund (OTKA) [K108572]
This research was supported by the Hungarian Scientific Research Fund (OTKA) Grant K108572.
6
1
35
Akademiai kiado zrt
Budapest
1588-2640
[biblio_custom1] =>
[biblio_custom2] =>
[biblio_custom3] =>
[biblio_custom4] =>
[biblio_custom5] =>
[biblio_custom6] =>
[biblio_custom7] =>
[biblio_research_notes] =>
[biblio_number_of_volumes] =>
[biblio_short_title] => Acta Microbiol. Immunol. Hung.Acta Microbiol. Immunol. Hung.
[biblio_alternate_title] => Acta Microbiol. Immunol. Hung.
[biblio_original_publication] =>
[biblio_reprint_edition] =>
[biblio_translated_title] =>
[biblio_section] =>
[biblio_citekey] => 597
[biblio_coins] =>
[biblio_doi] =>
[biblio_issn] =>
[biblio_auth_address] => [Barany, Agnes; Krett, Gergely; Marialigeti, Karoly; Borsodi, Andrea K.] Eotvos Lorand Univ, Dept Microbiol, H-1117 Budapest, Hungary. [Szili-Kovacs, Tibor; Fuezy, Anna] Hungarian Acad Sci, Agr Res Ctr, Inst Soil Sci & Agr Chem, H-1022 Budapest, Hungary.
Borsodi, AK (corresponding author), Eotvos Lorand Univ, Dept Microbiol, Pazmany P Setany 1-C, H-1117 Budapest, Hungary.
borsodi.andrea@ttk.elte.hu
[biblio_remote_db_name] =>
[biblio_remote_db_provider] =>
[biblio_label] =>
[biblio_access_date] =>
[biblio_refereed] =>
[biblio_md5] => 4f38a1e63cc7b033de4d6b98ab63d885
[biblio_formats] => Array
(
[biblio_abst_e] => full_html
[biblio_abst_f] => full_html
[biblio_notes] => full_html
[biblio_research_notes] => full_html
[biblio_custom1] => full_html
[biblio_custom2] => full_html
[biblio_custom3] => full_html
[biblio_custom4] => full_html
[biblio_custom5] => full_html
[biblio_custom6] => full_html
[biblio_custom7] => full_html
[biblio_coins] => full_html
[biblio_auth_address] => full_html
)
[biblio_type_name] => Journal Article
[biblio_contributors] => Array
(
[0] => Array
(
[nid] => 597
[vid] => 725
[cid] => 1660
[auth_type] => 1
[auth_category] => 1
[rank] => 0
[merge_cid] => 0
[aka] => 0
[alt_form] => 0
[drupal_uid] =>
[name] => Barany, A.
[lastname] => Barany
[firstname] => A.
[prefix] =>
[suffix] =>
[initials] =>
[affiliation] =>
[literal] => 0
[md5] => 5eb0332db37ddaf753b4a8350133e320
)
[1] => Array
(
[nid] => 597
[vid] => 725
[cid] => 1053
[auth_type] => 1
[auth_category] => 1
[rank] => 1
[merge_cid] => 0
[aka] => 0
[alt_form] => 0
[drupal_uid] =>
[name] => Szili-Kovacs, T.
[lastname] => Szili-Kovacs
[firstname] => T.
[prefix] =>
[suffix] =>
[initials] =>
[affiliation] =>
[literal] => 0
[md5] => 3e24ec74e9a1fd3291a9b3e05fb373dc
)
[2] => Array
(
[nid] => 597
[vid] => 725
[cid] => 1379
[auth_type] => 1
[auth_category] => 1
[rank] => 2
[merge_cid] => 0
[aka] => 0
[alt_form] => 0
[drupal_uid] =>
[name] => Krett, G.
[lastname] => Krett
[firstname] => G.
[prefix] =>
[suffix] =>
[initials] =>
[affiliation] =>
[literal] => 0
[md5] => 22298d538262feff6d9108ff99c0346d
)
[3] => Array
(
[nid] => 597
[vid] => 725
[cid] => 1050
[auth_type] => 1
[auth_category] => 1
[rank] => 3
[merge_cid] => 0
[aka] => 0
[alt_form] => 0
[drupal_uid] =>
[name] => Fuzy, A.
[lastname] => Fuzy
[firstname] => A.
[prefix] =>
[suffix] =>
[initials] =>
[affiliation] =>
[literal] => 0
[md5] => c1deb2a359c2fb791b25dba4c0a8a4a7
)
[4] => Array
(
[nid] => 597
[vid] => 725
[cid] => 1321
[auth_type] => 1
[auth_category] => 1
[rank] => 4
[merge_cid] => 0
[aka] => 0
[alt_form] => 0
[drupal_uid] =>
[name] => Marialigeti, K.
[lastname] => Marialigeti
[firstname] => K.
[prefix] =>
[suffix] =>
[initials] =>
[affiliation] =>
[literal] => 0
[md5] => 71868ecd5cc72bb11d63aec279146131
)
[5] => Array
(
[nid] => 597
[vid] => 725
[cid] => 1316
[auth_type] => 1
[auth_category] => 1
[rank] => 5
[merge_cid] => 0
[aka] => 0
[alt_form] => 0
[drupal_uid] =>
[name] => Borsodi, A. K.
[lastname] => Borsodi
[firstname] => A.
[prefix] =>
[suffix] =>
[initials] => K.
[affiliation] =>
[literal] => 0
[md5] => e78cd0528111094b9578b8db293e9ba2
)
)
[biblio_keywords] => Array
(
[263] => bacterial communities
[3] => biomass
[135] => carbon
[139] => DGGE
[1954] => Immunology
[881] => Microbiology
[21] => MicroResp
[1953] => rhizosphere bacterial communities
[30] => sir
[1952] => soda soil
[83] => soil
)
[body] => Array
(
)
[rdf_mapping] => Array
(
[rdftype] => Array
(
[0] => sioc:Item
[1] => foaf:Document
)
[title] => Array
(
[predicates] => Array
(
[0] => dc:title
)
)
[created] => Array
(
[predicates] => Array
(
[0] => dc:date
[1] => dc:created
)
[datatype] => xsd:dateTime
[callback] => date_iso8601
)
[changed] => Array
(
[predicates] => Array
(
[0] => dc:modified
)
[datatype] => xsd:dateTime
[callback] => date_iso8601
)
[body] => Array
(
[predicates] => Array
(
[0] => content:encoded
)
)
[uid] => Array
(
[predicates] => Array
(
[0] => sioc:has_creator
)
[type] => rel
)
[name] => Array
(
[predicates] => Array
(
[0] => foaf:name
)
)
[comment_count] => Array
(
[predicates] => Array
(
[0] => sioc:num_replies
)
[datatype] => xsd:integer
)
[last_activity] => Array
(
[predicates] => Array
(
[0] => sioc:last_activity_date
)
[datatype] => xsd:dateTime
[callback] => date_iso8601
)
)
[name] => clare.cameron
[picture] => 0
[data] => a:13:{s:16:"ckeditor_default";s:1:"t";s:20:"ckeditor_show_toggle";s:1:"t";s:14:"ckeditor_width";s:4:"100%";s:13:"ckeditor_lang";s:2:"en";s:18:"ckeditor_auto_lang";s:1:"t";s:19:"biblio_show_profile";i:0;s:19:"biblio_my_pubs_menu";i:0;s:21:"biblio_contributor_id";s:1:"0";s:22:"biblio_id_change_count";s:1:"0";s:17:"biblio_user_style";s:6:"system";s:18:"biblio_baseopenurl";s:0:"";s:18:"biblio_openurl_sid";s:0:"";s:19:"biblio_crossref_pid";s:0:"";}
[entity_view_prepared] => 1
)