Publications

Sradnick A, Murugan R, Oltmanns M, Raupp J, Joergensen RGeorg.  2013.  Changes in functional diversity of the soil microbial community in a heterogeneous sandy soil after long-term fertilization with cattle manure and mineral fertilizer. Applied Soil Ecology. 63:23-28.

Cordovil C.MDS, de Varennes A., Pinto R., Fernandes R.C.  2011.  Changes in mineral nitrogen, soil organic matter fractions and microbial community level physiological profiles after application of digested pig slurry and compost from municipal organic wastes to burned soils. Soil Biology and Biochemistry. 43:845-852.

de Vries F.T, Williams A., Stringer F., Willcocks R., McEwing R., Langridge H., Straathof A.L.  2019.  Changes in root-exudate-induced respiration reveal a novel mechanism through which drought affects ecosystem carbon cycling. New Phytologist. 224:132-145.

Gao F., Fan H.X, Chapman S.J, Yao H.Y.  2022.  Changes in soil microbial community activity and composition following substrate amendment within the MicroResp (TM) system. Journal of Soils and Sediments. 22:1242-1251.

Shihan A., Hattenschwiler S., Milcu A., Joly F.X, Santonja M., Fromin N..  2017.  Changes in soil microbial substrate utilization in response to altered litter diversity and precipitation in a Mediterranean shrubland. Biology and Fertility of Soils. 53:171-185.

Zhang K., Wang S., Guo P.H, Guo S.H.  2021.  Characteristics of organic carbon metabolism and bioremediation of petroleum-contaminated soil by a mesophilic aerobic biopile system. Chemosphere. 264:11.

Squartini A, Fusaro S, Concheri G.  2018.  Cheap and portable lab-free respiration assay. Applied Soil Ecology. 123:797-801.

McDaniel M.D, Kaye J.P, Kaye M.W, Bruns M.A.  2014.  Climate change interactions affect soil carbon dioxide efflux and microbial functioning in a post-harvest forest. Oecologia. 174:1437-1448.

Dacal M., Garcia-Palacios P., Asensio S., Wang J.T, Singh B.K, Maestre F.T.  2022.  Climate change legacies contrastingly affect the resistance and resilience of soil microbial communities and multifunctionality to extreme drought. Functional Ecology. 36:908-920.

Astacio L.MD, Prabhakara K.H, Li Z.Q, Mickalide H., Kuehn S..  2021.  Closed microbial communities self-organize to carbon. Proceedings of the National Academy of Sciences of the United States of America. 118:9.

Juárez MFernández, Prähauser B, Walter A, Insam H, Franke-Whittle IH.  2015.  Co-composting of biowaste and wood ash, influence on a microbially driven-process. Waste Management. 46:155-164.

Holatko J., Hammerschmiedt T., Kintl A., Mustafa A., Naveed M., Baltazar T., Latal O., Skarpa P., Ryant P., Brtnicky M..  2022.  Co-composting of cattle manure with biochar and elemental sulphur and its effects on manure quality, plant biomass and microbiological characteristics of post-harvest soil. Frontiers in Plant Science. 13:14.

Fritz A.L, Jannoura R., Beuschel R., Steiner C., Buerkert A., Joergensen R.G.  2022.  The combined application of nitrogen and biochar reduced microbial carbon limitation in irrigated soils of West African urban horticulture. Chemical and Biological Technologies in Agriculture. 9:12.

Hammerschmiedt T., Holatko J., Zelinka R., Kintl A., Skarpa P., Bytesnikova Z., Richtera L., Mustafa A., Malicek O., Brtnicky M..  2023.  The combined effect of graphene oxide and elemental nano-sulfur on soil biological properties and lettuce plant biomass. Frontiers in Plant Science. 14:10.

Xu Y.G, Yu W.T, Ma Q., Wang J., Zhou H., Jiang C.M.  2016.  The combined effect of sulfadiazine and copper on soil microbial activity and community structure. Ecotoxicology and Environmental Safety. 134:43-52.

Drut B., Fustec J., Oddos L., Cannavacciuolo M., Brauman A., Cassagne N..  2023.  The combined effects of faba bean and endogeic earthworms on soil microbial activity in intercrops. European Journal of Soil Biology. 117:11.

Drage S., Engelmeier D., Bachmann G., Sessitsch A., Mitter B., Hadacek F..  2012.  Combining microdilution with MicroResp (TM): Microbial substrate utilization, antimicrobial susceptibility and respiration. Journal of Microbiological Methods. 88:399-412.

Adapa L.M, Azimi Y., Singh S., Porcelli D., Thompson I.P.  2016.  Comparative study of chemical and physical methods for distinguishing between passive and metabolically active mechanisms of water contaminant removal by biofilms. Water Research. 101:574-581.

Vinten A.JA, Artz R.RE, Thomas N., Potts J.M, Avery L., Langan S.J, Watson H., Cook Y., Taylor C., Abel C. et al..  2011.  Comparison of microbial community assays for the assessment of stream biofilm ecology. Journal of Microbiological Methods. 85:190-198.

Ujvari G., Borsodi A.K, Megyes M., Mucsi M., Szili-Kovacs T., Szabo A., Szalai Z., Jakab G., Marialigeti K..  2020.  Comparison of Soil Bacterial Communities from Juvenile Maize Plants of a Long-Term Monoculture and a Natural Grassland. Agronomy-Basel. 10:15.

Mustafa A., Holatko J., Hammerschmiedt T., Kucerik J., Skarpa P., Kintl A., Racek J., Baltazar T., Malicek O., Brtnicky M..  2022.  Comparison of the Responses of Soil Enzymes, Microbial Respiration and Plant Growth Characteristics under the Application of Agricultural and Food Waste-Derived Biochars. Agronomy-Basel. 12:14.

Lalor B.M, Cookson W.R, Murphy D.V.  2007.  Comparison of two methods that assess soil community level physiological profiles in a forest ecosystem. Soil Biology and Biochemistry. 39:454-462.

Foster KR, Bell T.  2012.  Competition, Not Cooperation, Dominates Interactions among Culturable Microbial Species. Current Biology. 22:1845-1850.

Chodak M., Klimek B., Niklinska M..  2016.  Composition and activity of soil microbial communities in different types of temperate forests. Biology and Fertility of Soils. 52:1093-1104.

Wacker T.S, Jensen L.S, Thorup-Kristensen K..  2022.  Conservation agriculture affects soil organic matter distribution, microbial metabolic capacity and nitrogen turnover under Danish field conditions. Soil & Tillage ResearchSoil & Tillage Research. 224:13.