Frequent freeze-thaw cycles yield diminished yet resistant and responsive microbial communities in two temperate soils: a laboratory experiment

TitleFrequent freeze-thaw cycles yield diminished yet resistant and responsive microbial communities in two temperate soils: a laboratory experiment
Publication TypeJournal Article
Year of Publication2010
AuthorsStres B., Philippot L., Faganeli J., Tiedje J.M
JournalFems Microbiology Ecology
Volume74
Pagination323-335
Date PublishedNov
Type of ArticleArticle
ISBN Number0168-6496
Accession NumberWOS:000282883200006
KeywordsADAPTATION, arctic tundra soils, bacterial communities, Basal respiration, biomass, carbon, cold soil, community-level, extracellular DNA, freeze-thaw, Himalaya, Microbiology, physiological profiles, physiological profiling, respiration, succession, water-content
Abstract

Few studies have been conducted on adaptations of microbial communities to low and fluctuating temperatures using environmentally relevant conditions. In this study, six Himalayan and two temperate soils were selected as candidates for low-temperature/freeze-thaw (FT)-adapted and susceptible soils, respectively. Redundancy analysis with forward selection was used to create a model of environmental parameters explaining variability in the initial microbial abundance and 4 degrees C activities. The best predictor was soil carbon, explaining more than 74% of data variability (P=0.002), despite significant differences in the soil characteristics and environmental history. We tested the hypothesis that the reproduced Himalayan FT fluctuations select physiologically similar communities in distinct soils. Microcosms were experimentally subjected to two separate 50 and 60 FT cycle (FTC) experiments. A significant decrease in abundance, 4 degrees C basal respiration and drastic rearrangements in community-level physiological profiles (CLPP) were observed in microcosms with temperate soils until 40 FTC. CLPP remained distinct from those of the Himalayan soils. Minor changes were observed in the Himalayan soils, confirming that microbial populations with physiological traits consistent with the noncontinuous permafrost conditions reside in the Himalayan soils, whereas the surviving temperate soil microorganisms actively adjusted to novel environmental conditions.

Short TitleFEMS Microbiol. Ecol.FEMS Microbiol. Ecol.
Alternate JournalFEMS Microbiol. Ecol.
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Times Cited: 46
Cited Reference Count: 67
Stres, Blaz Philippot, Laurent Faganeli, Jadran Tiedje, James M.
Stres, Blaz/AAF-7279-2020; Philippot, Laurent/G-5598-2011
Stres, Blaz/0000-0003-2972-2907; Philippot, Laurent/0000-0003-3461-4492
Slovenian Research Agency (ARRS) [P0-0562-0481]; ESF [3311-05-837013 COST-856]; STSM
We are indebted to late Ivan Mahne, head of the Chair for microbiology, for the ideas and ongoing support during the 2002-2006 period. We acknowledge the efforts of Andrej Stremfelj and late Miha Valic, who provided visual material, additional soil temperature and eolian deposition measurements in the years 2005-2007. We thank Fiona Moore and Stephen Chapman (Macaulay Institute) for discussions during the initial adaptation of MicroResp (TM) and Teiji Watanabe (Hokkaido University) for releasing the complete 1998-2002 temperature measurements. This research was supported by the Slovenian Research Agency (ARRS) Agreement No. P0-0562-0481, ESF No. 3311-05-837013 COST-856 and STSM to B.S.
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Stres, B (corresponding author), Univ Ljubljana, Chair Microbiol & Microbial Biotechnol, Biotech Fac, Dept Anim Sci, Groblje 3, Domzale 1230, Slovenia.
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